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Cluster: Rep_84_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_0 Rep_84_c_0_2467 2921948 2923270 - GH13
CAZyme Rep_84_c_0 Rep_84_c_0_2468 2923320 2925197 - GH13_46
CAZyme Rep_84_c_0 Rep_84_c_0_2469 2925262 2927568 - GH65
pfam Rep_84_c_0 Rep_84_c_0_2470 2927616 2928281 - Hydrolase | HAD_2
TC Rep_84_c_0 Rep_84_c_0_2471 2928294 2929652 - 2.A.2.6.2
STP Rep_84_c_0 Rep_84_c_0_2472 2930094 2930375 - Peripla_BP_3
CAZyme Rep_84_c_0 Rep_84_c_0_2473 2930531 2931901 - GH13
CAZyme Rep_84_c_0 Rep_84_c_0_2474 2931965 2934343 - GH13_45
TC Rep_84_c_0 Rep_84_c_0_2475 2934711 2937683 + 1.B.14.6.1
Gene ID: Rep_84_c_0_2467
Type: CAZyme
Location: 2921948 - 2923270 (-)
Gene ID: Rep_84_c_0_2468
Type: CAZyme
Location: 2923320 - 2925197 (-)
Gene ID: Rep_84_c_0_2469
Type: CAZyme
Location: 2925262 - 2927568 (-)
Gene ID: Rep_84_c_0_2470
Type: pfam
Location: 2927616 - 2928281 (-)
Gene ID: Rep_84_c_0_2471
Type: TC
Location: 2928294 - 2929652 (-)
Gene ID: Rep_84_c_0_2472
Type: STP
Location: 2930094 - 2930375 (-)
Gene ID: Rep_84_c_0_2473
Type: CAZyme
Location: 2930531 - 2931901 (-)
Gene ID: Rep_84_c_0_2474
Type: CAZyme
Location: 2931965 - 2934343 (-)
Gene ID: Rep_84_c_0_2475
Type: TC
Location: 2934711 - 2937683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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