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Cluster: Rep_84_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_84_c_0 Rep_84_c_0_2216 2639172 2640278 - 2.A.86.1.11
pfam Rep_84_c_0 Rep_84_c_0_2217 2640477 2640686 + DUF4492
TC Rep_84_c_0 Rep_84_c_0_2218 2640691 2642283 + 3.D.4.3.2
pfam Rep_84_c_0 Rep_84_c_0_2219 2642308 2643426 + Cyt_bd_oxida_II
CAZyme Rep_84_c_0 Rep_84_c_0_2220 2643620 2646718 - GH2
peptidase Rep_84_c_0 Rep_84_c_0_2221 2647031 2648275 - C44.UNW
pfam Rep_84_c_0 Rep_84_c_0_2222 2648410 2648589 + TatA_B_E
TC Rep_84_c_0 Rep_84_c_0_2223 2648605 2649417 + 2.A.64.3.2
TC Rep_84_c_0 Rep_84_c_0_2224 2649498 2649866 + 9.B.55.1.2
TC Rep_84_c_0 Rep_84_c_0_2225 2649949 2652072 + 3.A.7.7.1
pfam Rep_84_c_0 Rep_84_c_0_2226 2652165 2652611 - DUF2059
TC Rep_84_c_0 Rep_84_c_0_2227 2652657 2653820 - 1.B.5.1.6
TC Rep_84_c_0 Rep_84_c_0_2228 2653839 2655512 - 2.A.53.3.11
pfam Rep_84_c_0 Rep_84_c_0_2229 2655839 2656474 + LUD_dom
TC Rep_84_c_0 Rep_84_c_0_2230 2656744 2658045 + 2.A.1.31.4
Gene ID: Rep_84_c_0_2216
Type: TC
Location: 2639172 - 2640278 (-)
Gene ID: Rep_84_c_0_2217
Type: pfam
Location: 2640477 - 2640686 (+)
Gene ID: Rep_84_c_0_2218
Type: TC
Location: 2640691 - 2642283 (+)
Gene ID: Rep_84_c_0_2219
Type: pfam
Location: 2642308 - 2643426 (+)
Gene ID: Rep_84_c_0_2220
Type: CAZyme
Location: 2643620 - 2646718 (-)
Gene ID: Rep_84_c_0_2221
Type: peptidase
Location: 2647031 - 2648275 (-)
Gene ID: Rep_84_c_0_2222
Type: pfam
Location: 2648410 - 2648589 (+)
Gene ID: Rep_84_c_0_2223
Type: TC
Location: 2648605 - 2649417 (+)
Gene ID: Rep_84_c_0_2224
Type: TC
Location: 2649498 - 2649866 (+)
Gene ID: Rep_84_c_0_2225
Type: TC
Location: 2649949 - 2652072 (+)
Gene ID: Rep_84_c_0_2226
Type: pfam
Location: 2652165 - 2652611 (-)
Gene ID: Rep_84_c_0_2227
Type: TC
Location: 2652657 - 2653820 (-)
Gene ID: Rep_84_c_0_2228
Type: TC
Location: 2653839 - 2655512 (-)
Gene ID: Rep_84_c_0_2229
Type: pfam
Location: 2655839 - 2656474 (+)
Gene ID: Rep_84_c_0_2230
Type: TC
Location: 2656744 - 2658045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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