Cluster: Rep_84_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_84
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_84_c_0 | Rep_84_c_0_2094 | 2493673 | 2494554 | - | 2.A.115.1.1 |
| pfam | Rep_84_c_0 | Rep_84_c_0_2095 | 2494556 | 2496262 | - | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| pfam | Rep_84_c_0 | Rep_84_c_0_2096 | 2496340 | 2498292 | + | Porin_10 |
| CAZyme | Rep_84_c_0 | Rep_84_c_0_2097 | 2498389 | 2499744 | + | GH23 |
| NULL(UNKNOWN) | Rep_84_c_0 | Rep_84_c_0_2098 | 2499871 | 2500623 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_84_c_0 | Rep_84_c_0_2099 | 2500893 | 2503274 | - | 9.A.8.1.6 |
Gene ID: Rep_84_c_0_2094
Type: TC
Location: 2493673 - 2494554 (-)
Type: TC
Location: 2493673 - 2494554 (-)
Gene ID: Rep_84_c_0_2095
Type: pfam
Location: 2494556 - 2496262 (-)
Type: pfam
Location: 2494556 - 2496262 (-)
Gene ID: Rep_84_c_0_2096
Type: pfam
Location: 2496340 - 2498292 (+)
Type: pfam
Location: 2496340 - 2498292 (+)
Gene ID: Rep_84_c_0_2097
Type: CAZyme
Location: 2498389 - 2499744 (+)
Type: CAZyme
Location: 2498389 - 2499744 (+)
Gene ID: Rep_84_c_0_2098
Type:
Location: 2499871 - 2500623 (+)
Type:
Location: 2499871 - 2500623 (+)
Gene ID: Rep_84_c_0_2099
Type: TC
Location: 2500893 - 2503274 (-)
Type: TC
Location: 2500893 - 2503274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter laneus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.