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Cluster: Rep_84_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_84_c_0 Rep_84_c_0_1941 2296475 2297758 - 9.A.40.1.2
NULL(UNKNOWN) Rep_84_c_0 Rep_84_c_0_1942 2297898 2298245 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_84_c_0 Rep_84_c_0_1943 2298385 2301153 - 2.A.21.9.2
STP Rep_84_c_0 Rep_84_c_0_1944 2301487 2303559 + HATPase_c
TC Rep_84_c_0 Rep_84_c_0_1945 2303572 2305629 + 2.A.21.9.2
NULL(UNKNOWN) Rep_84_c_0 Rep_84_c_0_1946 2305710 2305901 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_84_c_0 Rep_84_c_0_1947 2306541 2307704 - Aminotran_1_2
CAZyme Rep_84_c_0 Rep_84_c_0_1948 2307787 2308731 + GH23
Gene ID: Rep_84_c_0_1941
Type: TC
Location: 2296475 - 2297758 (-)
Gene ID: Rep_84_c_0_1942
Type:
Location: 2297898 - 2298245 (-)
Gene ID: Rep_84_c_0_1943
Type: TC
Location: 2298385 - 2301153 (-)
Gene ID: Rep_84_c_0_1944
Type: STP
Location: 2301487 - 2303559 (+)
Gene ID: Rep_84_c_0_1945
Type: TC
Location: 2303572 - 2305629 (+)
Gene ID: Rep_84_c_0_1946
Type:
Location: 2305710 - 2305901 (-)
Gene ID: Rep_84_c_0_1947
Type: STP
Location: 2306541 - 2307704 (-)
Gene ID: Rep_84_c_0_1948
Type: CAZyme
Location: 2307787 - 2308731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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