dbCAN Logo

Cluster: Rep_84_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_0 Rep_84_c_0_1930 2281774 2285163 + GH2
pfam Rep_84_c_0 Rep_84_c_0_1931 2285345 2287315 - BACON | BACON
TC Rep_84_c_0 Rep_84_c_0_1932 2287633 2288697 + 3.A.1.7.1
TC Rep_84_c_0 Rep_84_c_0_1933 2288832 2289614 + 3.A.1.7.1
TC Rep_84_c_0 Rep_84_c_0_1934 2289628 2290500 + 3.A.1.7.3
TC Rep_84_c_0 Rep_84_c_0_1935 2290485 2291042 + 3.A.1.7.2
TC Rep_84_c_0 Rep_84_c_0_1936 2291066 2291311 + 3.A.1.7.1
Gene ID: Rep_84_c_0_1930
Type: CAZyme
Location: 2281774 - 2285163 (+)
Gene ID: Rep_84_c_0_1931
Type: pfam
Location: 2285345 - 2287315 (-)
Gene ID: Rep_84_c_0_1932
Type: TC
Location: 2287633 - 2288697 (+)
Gene ID: Rep_84_c_0_1933
Type: TC
Location: 2288832 - 2289614 (+)
Gene ID: Rep_84_c_0_1934
Type: TC
Location: 2289628 - 2290500 (+)
Gene ID: Rep_84_c_0_1935
Type: TC
Location: 2290485 - 2291042 (+)
Gene ID: Rep_84_c_0_1936
Type: TC
Location: 2291066 - 2291311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List