Cluster: Rep_84_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_84
- CGC Family ID: CGCFAM_00018
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_84_c_0 | Rep_84_c_0_1835 | 2169168 | 2170277 | + | GT4 |
| TC | Rep_84_c_0 | Rep_84_c_0_1836 | 2170292 | 2171365 | + | 9.B.18.2.1 |
| pfam | Rep_84_c_0 | Rep_84_c_0_1837 | 2171437 | 2172585 | + | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| pfam | Rep_84_c_0 | Rep_84_c_0_1838 | 2172596 | 2173738 | + | Epimerase_2 |
| CAZyme | Rep_84_c_0 | Rep_84_c_0_1839 | 2173745 | 2174953 | + | GT4 |
| TC | Rep_84_c_0 | Rep_84_c_0_1840 | 2174959 | 2175564 | + | 9.B.18.1.3 |
Gene ID: Rep_84_c_0_1835
Type: CAZyme
Location: 2169168 - 2170277 (+)
Type: CAZyme
Location: 2169168 - 2170277 (+)
Gene ID: Rep_84_c_0_1836
Type: TC
Location: 2170292 - 2171365 (+)
Type: TC
Location: 2170292 - 2171365 (+)
Gene ID: Rep_84_c_0_1837
Type: pfam
Location: 2171437 - 2172585 (+)
Type: pfam
Location: 2171437 - 2172585 (+)
Gene ID: Rep_84_c_0_1838
Type: pfam
Location: 2172596 - 2173738 (+)
Type: pfam
Location: 2172596 - 2173738 (+)
Gene ID: Rep_84_c_0_1839
Type: CAZyme
Location: 2173745 - 2174953 (+)
Type: CAZyme
Location: 2173745 - 2174953 (+)
Gene ID: Rep_84_c_0_1840
Type: TC
Location: 2174959 - 2175564 (+)
Type: TC
Location: 2174959 - 2175564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter laneus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.