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Cluster: Rep_84_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_84_c_0 Rep_84_c_0_1586 1896513 1898858 - GH92
CAZyme Rep_84_c_0 Rep_84_c_0_1587 1899048 1901384 - GH92
CAZyme Rep_84_c_0 Rep_84_c_0_1588 1901402 1902526 - CBM32
pfam Rep_84_c_0 Rep_84_c_0_1589 1903010 1905367 - FtsX | FtsX | MacB_PCD
TC Rep_84_c_0 Rep_84_c_0_1590 1905610 1907862 - 2.A.37.1.5
TC Rep_84_c_0 Rep_84_c_0_1591 1907969 1909525 + 2.A.36.6.11
peptidase Rep_84_c_0 Rep_84_c_0_1592 1910324 1911505 - C01.UPA
TC Rep_84_c_0 Rep_84_c_0_1593 1911520 1912971 - 8.A.46.3.2
TC Rep_84_c_0 Rep_84_c_0_1594 1912982 1916443 - 1.B.14.6.1
Gene ID: Rep_84_c_0_1586
Type: CAZyme
Location: 1896513 - 1898858 (-)
Gene ID: Rep_84_c_0_1587
Type: CAZyme
Location: 1899048 - 1901384 (-)
Gene ID: Rep_84_c_0_1588
Type: CAZyme
Location: 1901402 - 1902526 (-)
Gene ID: Rep_84_c_0_1589
Type: pfam
Location: 1903010 - 1905367 (-)
Gene ID: Rep_84_c_0_1590
Type: TC
Location: 1905610 - 1907862 (-)
Gene ID: Rep_84_c_0_1591
Type: TC
Location: 1907969 - 1909525 (+)
Gene ID: Rep_84_c_0_1592
Type: peptidase
Location: 1910324 - 1911505 (-)
Gene ID: Rep_84_c_0_1593
Type: TC
Location: 1911520 - 1912971 (-)
Gene ID: Rep_84_c_0_1594
Type: TC
Location: 1912982 - 1916443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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