Cluster: Rep_84_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_84
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_84_c_0 | Rep_84_c_0_205 | 239062 | 240090 | + | 9.B.146.1.3 |
| pfam | Rep_84_c_0 | Rep_84_c_0_206 | 240149 | 241501 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | Rep_84_c_0 | Rep_84_c_0_207 | 241548 | 242777 | + | 2.A.103.1.3 |
| CAZyme | Rep_84_c_0 | Rep_84_c_0_208 | 242781 | 243896 | + | GT28 |
Gene ID: Rep_84_c_0_205
Type: TC
Location: 239062 - 240090 (+)
Type: TC
Location: 239062 - 240090 (+)
Gene ID: Rep_84_c_0_206
Type: pfam
Location: 240149 - 241501 (+)
Type: pfam
Location: 240149 - 241501 (+)
Gene ID: Rep_84_c_0_207
Type: TC
Location: 241548 - 242777 (+)
Type: TC
Location: 241548 - 242777 (+)
Gene ID: Rep_84_c_0_208
Type: CAZyme
Location: 242781 - 243896 (+)
Type: CAZyme
Location: 242781 - 243896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter laneus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_84_c_0_205 | vegetarian > vegan | 1.12098 | 0.03761 |