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Cluster: Rep_84_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_84_c_0 Rep_84_c_0_794 927750 928955 - 2.A.1.7.8
TC Rep_84_c_0 Rep_84_c_0_795 929204 930439 + 1.A.23.4.5
TF Rep_84_c_0 Rep_84_c_0_796 930573 934610 + 0035607
CAZyme Rep_84_c_0 Rep_84_c_0_797 934721 936526 + GH2
TC Rep_84_c_0 Rep_84_c_0_798 936575 939760 + 1.B.14.6.1
pfam Rep_84_c_0 Rep_84_c_0_799 939809 941608 + SusD_RagB | SusD-like_3
pfam Rep_84_c_0 Rep_84_c_0_800 941698 942906 + BT_3987-like_N
CAZyme Rep_84_c_0 Rep_84_c_0_801 942925 945135 + GH89
STP Rep_84_c_0 Rep_84_c_0_802 945187 946008 + SIS
CAZyme Rep_84_c_0 Rep_84_c_0_803 946019 947917 + GH20
Gene ID: Rep_84_c_0_794
Type: TC
Location: 927750 - 928955 (-)
Gene ID: Rep_84_c_0_795
Type: TC
Location: 929204 - 930439 (+)
Gene ID: Rep_84_c_0_796
Type: TF
Location: 930573 - 934610 (+)
Gene ID: Rep_84_c_0_797
Type: CAZyme
Location: 934721 - 936526 (+)
Gene ID: Rep_84_c_0_798
Type: TC
Location: 936575 - 939760 (+)
Gene ID: Rep_84_c_0_799
Type: pfam
Location: 939809 - 941608 (+)
Gene ID: Rep_84_c_0_800
Type: pfam
Location: 941698 - 942906 (+)
Gene ID: Rep_84_c_0_801
Type: CAZyme
Location: 942925 - 945135 (+)
Gene ID: Rep_84_c_0_802
Type: STP
Location: 945187 - 946008 (+)
Gene ID: Rep_84_c_0_803
Type: CAZyme
Location: 946019 - 947917 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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