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Cluster: Rep_847_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_0 Rep_847_c_0_473 537383 538840 + 2.A.3.3.22
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_474 538897 539439 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_847_c_0 Rep_847_c_0_475 539563 540057 - LuxS
TC Rep_847_c_0 Rep_847_c_0_476 540171 542129 - 2.A.16.2.2
pfam Rep_847_c_0 Rep_847_c_0_477 542396 543580 - DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
STP Rep_847_c_0 Rep_847_c_0_478 543770 544792 - PALP
TC Rep_847_c_0 Rep_847_c_0_479 545185 545970 - 3.A.1.5.41
TC Rep_847_c_0 Rep_847_c_0_480 545963 546754 - 3.A.1.5.26
TC Rep_847_c_0 Rep_847_c_0_481 546744 547730 - 3.A.1.5.11
TC Rep_847_c_0 Rep_847_c_0_482 547727 548704 - 3.A.1.5.38
TC Rep_847_c_0 Rep_847_c_0_483 548891 550525 - 3.A.1.5.1
pfam Rep_847_c_0 Rep_847_c_0_484 550652 551422 + Pan_kinase
TC Rep_847_c_0 Rep_847_c_0_485 551516 552937 - 3.A.1.1.48
TC Rep_847_c_0 Rep_847_c_0_486 553100 554446 - 3.A.1.1.34
CAZyme Rep_847_c_0 Rep_847_c_0_487 554702 556777 - GH42
TC Rep_847_c_0 Rep_847_c_0_488 556957 557955 - 3.A.1.1.48
TC Rep_847_c_0 Rep_847_c_0_489 558008 558934 - 3.A.1.1.48
Gene ID: Rep_847_c_0_473
Type: TC
Location: 537383 - 538840 (+)
Gene ID: Rep_847_c_0_474
Type:
Location: 538897 - 539439 (-)
Gene ID: Rep_847_c_0_475
Type: pfam
Location: 539563 - 540057 (-)
Gene ID: Rep_847_c_0_476
Type: TC
Location: 540171 - 542129 (-)
Gene ID: Rep_847_c_0_477
Type: pfam
Location: 542396 - 543580 (-)
Gene ID: Rep_847_c_0_478
Type: STP
Location: 543770 - 544792 (-)
Gene ID: Rep_847_c_0_479
Type: TC
Location: 545185 - 545970 (-)
Gene ID: Rep_847_c_0_480
Type: TC
Location: 545963 - 546754 (-)
Gene ID: Rep_847_c_0_481
Type: TC
Location: 546744 - 547730 (-)
Gene ID: Rep_847_c_0_482
Type: TC
Location: 547727 - 548704 (-)
Gene ID: Rep_847_c_0_483
Type: TC
Location: 548891 - 550525 (-)
Gene ID: Rep_847_c_0_484
Type: pfam
Location: 550652 - 551422 (+)
Gene ID: Rep_847_c_0_485
Type: TC
Location: 551516 - 552937 (-)
Gene ID: Rep_847_c_0_486
Type: TC
Location: 553100 - 554446 (-)
Gene ID: Rep_847_c_0_487
Type: CAZyme
Location: 554702 - 556777 (-)
Gene ID: Rep_847_c_0_488
Type: TC
Location: 556957 - 557955 (-)
Gene ID: Rep_847_c_0_489
Type: TC
Location: 558008 - 558934 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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