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Cluster: Rep_847_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_0 Rep_847_c_0_452 513426 514955 - 3.A.1.122.2
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_453 514967 516262 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_847_c_0 Rep_847_c_0_454 516274 517086 - 3.A.1.125.3
pfam Rep_847_c_0 Rep_847_c_0_455 517781 518272 - PMSR
TC Rep_847_c_0 Rep_847_c_0_456 518274 519893 - 3.A.1.5.35
pfam Rep_847_c_0 Rep_847_c_0_457 519999 520202 - HTH_Tnp_1 | HTH_23 | HTH_28
CAZyme Rep_847_c_0 Rep_847_c_0_458 520407 522221 - GH13_31
TF Rep_847_c_0 Rep_847_c_0_459 522202 523446 - LacI
TC Rep_847_c_0 Rep_847_c_0_460 523458 524789 - 3.A.1.1.44
Gene ID: Rep_847_c_0_452
Type: TC
Location: 513426 - 514955 (-)
Gene ID: Rep_847_c_0_453
Type:
Location: 514967 - 516262 (-)
Gene ID: Rep_847_c_0_454
Type: TC
Location: 516274 - 517086 (-)
Gene ID: Rep_847_c_0_455
Type: pfam
Location: 517781 - 518272 (-)
Gene ID: Rep_847_c_0_456
Type: TC
Location: 518274 - 519893 (-)
Gene ID: Rep_847_c_0_457
Type: pfam
Location: 519999 - 520202 (-)
Gene ID: Rep_847_c_0_458
Type: CAZyme
Location: 520407 - 522221 (-)
Gene ID: Rep_847_c_0_459
Type: TF
Location: 522202 - 523446 (-)
Gene ID: Rep_847_c_0_460
Type: TC
Location: 523458 - 524789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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