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Cluster: Rep_847_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_0 Rep_847_c_0_379 437577 438287 + 3.A.1.122.16
TC Rep_847_c_0 Rep_847_c_0_380 438284 439072 + 3.A.1.139.3
STP Rep_847_c_0 Rep_847_c_0_381 439290 439976 - EAL
STP Rep_847_c_0 Rep_847_c_0_382 439963 441747 - GGDEF
CAZyme Rep_847_c_0 Rep_847_c_0_383 441836 443146 - CBM5 | GH18
CAZyme Rep_847_c_0 Rep_847_c_0_384 443388 445655 + GT2
Gene ID: Rep_847_c_0_379
Type: TC
Location: 437577 - 438287 (+)
Gene ID: Rep_847_c_0_380
Type: TC
Location: 438284 - 439072 (+)
Gene ID: Rep_847_c_0_381
Type: STP
Location: 439290 - 439976 (-)
Gene ID: Rep_847_c_0_382
Type: STP
Location: 439963 - 441747 (-)
Gene ID: Rep_847_c_0_383
Type: CAZyme
Location: 441836 - 443146 (-)
Gene ID: Rep_847_c_0_384
Type: CAZyme
Location: 443388 - 445655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_847_c_0_379 vegetarian > omnivore 1.08847 0.00272
Rep_847_c_0_380 vegetarian > omnivore 1.06789 0.00272
Rep_847_c_0_381 vegan > omnivore 1.74267 0.01052
Rep_847_c_0_382 vegan > omnivore 4.24110 0.01052
Rep_847_c_0_382 vegetarian > omnivore 3.44511 0.00272
Rep_847_c_0_383 vegan > omnivore 4.27942 0.01052
Rep_847_c_0_383 vegetarian > omnivore 3.62414 0.00272
Rep_847_c_0_384 vegan > omnivore 4.20317 0.01052
Rep_847_c_0_384 vegetarian > omnivore 3.59394 0.00272

🧭 Explore Read Mapping of CGC

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