Cluster: Rep_847_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_847
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_847_c_3 | Rep_847_c_3_166 | 186069 | 187439 | + | 2.A.66.1.32 |
| STP | Rep_847_c_3 | Rep_847_c_3_167 | 187518 | 189359 | - | NTP_transf_2 |
| pfam | Rep_847_c_3 | Rep_847_c_3_168 | 189676 | 190014 | - | P-II |
| TC | Rep_847_c_3 | Rep_847_c_3_169 | 190016 | 191311 | - | 1.A.11.1.3 |
| TC | Rep_847_c_3 | Rep_847_c_3_170 | 191619 | 192884 | - | 3.A.5.2.2 |
| STP | Rep_847_c_3 | Rep_847_c_3_171 | 192951 | 193799 | + | TetR_N |
| CAZyme | Rep_847_c_3 | Rep_847_c_3_172 | 193823 | 194857 | + | GT2 |
Gene ID: Rep_847_c_3_166
Type: TC
Location: 186069 - 187439 (+)
Type: TC
Location: 186069 - 187439 (+)
Gene ID: Rep_847_c_3_167
Type: STP
Location: 187518 - 189359 (-)
Type: STP
Location: 187518 - 189359 (-)
Gene ID: Rep_847_c_3_168
Type: pfam
Location: 189676 - 190014 (-)
Type: pfam
Location: 189676 - 190014 (-)
Gene ID: Rep_847_c_3_169
Type: TC
Location: 190016 - 191311 (-)
Type: TC
Location: 190016 - 191311 (-)
Gene ID: Rep_847_c_3_170
Type: TC
Location: 191619 - 192884 (-)
Type: TC
Location: 191619 - 192884 (-)
Gene ID: Rep_847_c_3_171
Type: STP
Location: 192951 - 193799 (+)
Type: STP
Location: 192951 - 193799 (+)
Gene ID: Rep_847_c_3_172
Type: CAZyme
Location: 193823 - 194857 (+)
Type: CAZyme
Location: 193823 - 194857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.