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Cluster: Rep_847_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_847_c_0 Rep_847_c_0_164 184803 186047 + CE9
CAZyme Rep_847_c_0 Rep_847_c_0_165 186310 187887 - GT35
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_166 187990 188112 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_847_c_0 Rep_847_c_0_167 188283 190334 - 2.A.1.3.39
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_168 190565 190675 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_847_c_0 Rep_847_c_0_169 191174 191875 + TetR_N
TC Rep_847_c_0 Rep_847_c_0_170 192032 193303 + 2.A.1.21.3
Gene ID: Rep_847_c_0_164
Type: CAZyme
Location: 184803 - 186047 (+)
Gene ID: Rep_847_c_0_165
Type: CAZyme
Location: 186310 - 187887 (-)
Gene ID: Rep_847_c_0_166
Type:
Location: 187990 - 188112 (-)
Gene ID: Rep_847_c_0_167
Type: TC
Location: 188283 - 190334 (-)
Gene ID: Rep_847_c_0_168
Type:
Location: 190565 - 190675 (-)
Gene ID: Rep_847_c_0_169
Type: STP
Location: 191174 - 191875 (+)
Gene ID: Rep_847_c_0_170
Type: TC
Location: 192032 - 193303 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_847_c_0_166 vegetarian > vegan 1.04496 0.03408

🧭 Explore Read Mapping of CGC

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