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Cluster: Rep_847_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_2 Rep_847_c_2_91 115075 115740 + 9.B.28.1.3
TF Rep_847_c_2 Rep_847_c_2_92 115744 116805 + LacI
CAZyme Rep_847_c_2 Rep_847_c_2_93 117075 118472 + GH32
TC Rep_847_c_2 Rep_847_c_2_94 118677 119990 + 3.A.1.1.45
CAZyme Rep_847_c_2 Rep_847_c_2_95 120482 123055 - GH31_15
TF Rep_847_c_2 Rep_847_c_2_96 123210 124223 - LacI
pfam Rep_847_c_2 Rep_847_c_2_97 124387 125493 - HTH_38
CAZyme Rep_847_c_2 Rep_847_c_2_98 125613 126377 + GH13_30
NULL(UNKNOWN) Rep_847_c_2 Rep_847_c_2_99 126402 126785 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_847_c_2 Rep_847_c_2_100 126878 127339 + DUF3459
TC Rep_847_c_2 Rep_847_c_2_101 127905 128741 - 3.A.1.1.45
TC Rep_847_c_2 Rep_847_c_2_102 128738 129592 - 3.A.1.1.45
NULL(UNKNOWN) Rep_847_c_2 Rep_847_c_2_103 130097 130315 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_847_c_2 Rep_847_c_2_104 130312 130749 + Peripla_BP_3
TC Rep_847_c_2 Rep_847_c_2_105 130893 131324 - 3.A.1.1.45
TC Rep_847_c_2 Rep_847_c_2_106 131447 132229 - 3.A.1.1.45
NULL(UNKNOWN) Rep_847_c_2 Rep_847_c_2_107 132738 132869 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_847_c_2 Rep_847_c_2_108 132908 134008 - GH172
pfam Rep_847_c_2 Rep_847_c_2_109 134188 135564 - SBP_bac_8
TF Rep_847_c_2 Rep_847_c_2_110 135801 136835 - LacI
TC Rep_847_c_2 Rep_847_c_2_111 137198 138583 + 3.A.1.1.45
pfam Rep_847_c_2 Rep_847_c_2_112 138972 139451 - Ferritin
TC Rep_847_c_2 Rep_847_c_2_113 139614 140957 - 9.A.40.2.1
Gene ID: Rep_847_c_2_91
Type: TC
Location: 115075 - 115740 (+)
Gene ID: Rep_847_c_2_92
Type: TF
Location: 115744 - 116805 (+)
Gene ID: Rep_847_c_2_93
Type: CAZyme
Location: 117075 - 118472 (+)
Gene ID: Rep_847_c_2_94
Type: TC
Location: 118677 - 119990 (+)
Gene ID: Rep_847_c_2_95
Type: CAZyme
Location: 120482 - 123055 (-)
Gene ID: Rep_847_c_2_96
Type: TF
Location: 123210 - 124223 (-)
Gene ID: Rep_847_c_2_97
Type: pfam
Location: 124387 - 125493 (-)
Gene ID: Rep_847_c_2_98
Type: CAZyme
Location: 125613 - 126377 (+)
Gene ID: Rep_847_c_2_99
Type:
Location: 126402 - 126785 (+)
Gene ID: Rep_847_c_2_100
Type: pfam
Location: 126878 - 127339 (+)
Gene ID: Rep_847_c_2_101
Type: TC
Location: 127905 - 128741 (-)
Gene ID: Rep_847_c_2_102
Type: TC
Location: 128738 - 129592 (-)
Gene ID: Rep_847_c_2_103
Type:
Location: 130097 - 130315 (+)
Gene ID: Rep_847_c_2_104
Type: STP
Location: 130312 - 130749 (+)
Gene ID: Rep_847_c_2_105
Type: TC
Location: 130893 - 131324 (-)
Gene ID: Rep_847_c_2_106
Type: TC
Location: 131447 - 132229 (-)
Gene ID: Rep_847_c_2_107
Type:
Location: 132738 - 132869 (-)
Gene ID: Rep_847_c_2_108
Type: CAZyme
Location: 132908 - 134008 (-)
Gene ID: Rep_847_c_2_109
Type: pfam
Location: 134188 - 135564 (-)
Gene ID: Rep_847_c_2_110
Type: TF
Location: 135801 - 136835 (-)
Gene ID: Rep_847_c_2_111
Type: TC
Location: 137198 - 138583 (+)
Gene ID: Rep_847_c_2_112
Type: pfam
Location: 138972 - 139451 (-)
Gene ID: Rep_847_c_2_113
Type: TC
Location: 139614 - 140957 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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