Cluster: Rep_847_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_847
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_847_c_2 | Rep_847_c_2_34 | 43500 | 44627 | - | 3.A.1.1.45 |
| TF | Rep_847_c_2 | Rep_847_c_2_35 | 44948 | 45688 | - | GntR |
| TC | Rep_847_c_2 | Rep_847_c_2_36 | 45816 | 47195 | - | 4.A.7.1.2 |
| pfam | Rep_847_c_2 | Rep_847_c_2_37 | 47292 | 47588 | - | PTS_IIB |
| TC | Rep_847_c_2 | Rep_847_c_2_38 | 47637 | 48071 | - | 4.A.7.1.2 |
| CAZyme | Rep_847_c_2 | Rep_847_c_2_39 | 48350 | 49510 | - | GT2 |
Gene ID: Rep_847_c_2_34
Type: TC
Location: 43500 - 44627 (-)
Type: TC
Location: 43500 - 44627 (-)
Gene ID: Rep_847_c_2_35
Type: TF
Location: 44948 - 45688 (-)
Type: TF
Location: 44948 - 45688 (-)
Gene ID: Rep_847_c_2_36
Type: TC
Location: 45816 - 47195 (-)
Type: TC
Location: 45816 - 47195 (-)
Gene ID: Rep_847_c_2_37
Type: pfam
Location: 47292 - 47588 (-)
Type: pfam
Location: 47292 - 47588 (-)
Gene ID: Rep_847_c_2_38
Type: TC
Location: 47637 - 48071 (-)
Type: TC
Location: 47637 - 48071 (-)
Gene ID: Rep_847_c_2_39
Type: CAZyme
Location: 48350 - 49510 (-)
Type: CAZyme
Location: 48350 - 49510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.