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Cluster: Rep_847_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_0 Rep_847_c_0_146 163494 164555 - 2.A.20.1.7
CAZyme Rep_847_c_0 Rep_847_c_0_147 164730 166025 + GH13_20
TC Rep_847_c_0 Rep_847_c_0_148 166065 168092 - 1.I.1.1.3
TC Rep_847_c_0 Rep_847_c_0_149 168465 169754 - 2.A.40.1.3
pfam Rep_847_c_0 Rep_847_c_0_150 169862 170692 - His_Phos_1
pfam Rep_847_c_0 Rep_847_c_0_151 170743 171324 - HAD
TC Rep_847_c_0 Rep_847_c_0_152 171444 172814 - 2.A.1.31.4
Gene ID: Rep_847_c_0_146
Type: TC
Location: 163494 - 164555 (-)
Gene ID: Rep_847_c_0_147
Type: CAZyme
Location: 164730 - 166025 (+)
Gene ID: Rep_847_c_0_148
Type: TC
Location: 166065 - 168092 (-)
Gene ID: Rep_847_c_0_149
Type: TC
Location: 168465 - 169754 (-)
Gene ID: Rep_847_c_0_150
Type: pfam
Location: 169862 - 170692 (-)
Gene ID: Rep_847_c_0_151
Type: pfam
Location: 170743 - 171324 (-)
Gene ID: Rep_847_c_0_152
Type: TC
Location: 171444 - 172814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_847_c_0_151 vegan > omnivore 1.17709 0.01052
Rep_847_c_0_152 vegan > omnivore 1.38072 0.01052
Rep_847_c_0_152 vegetarian > omnivore 1.22298 0.00272

🧭 Explore Read Mapping of CGC

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