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Cluster: Rep_847_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_847_c_0 Rep_847_c_0_67 73284 74528 - 2.A.1.21.21
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_68 74500 75210 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_847_c_0 Rep_847_c_0_69 75574 76419 - S6PP | Hydrolase_3
TC Rep_847_c_0 Rep_847_c_0_70 76519 77367 - 3.A.1.105.17
CAZyme Rep_847_c_0 Rep_847_c_0_71 77558 78808 - GT5
NULL(UNKNOWN) Rep_847_c_0 Rep_847_c_0_72 78937 79401 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_847_c_0 Rep_847_c_0_73 79509 81404 - GH129
TC Rep_847_c_0 Rep_847_c_0_74 81561 83201 - 3.A.1.5.35
Gene ID: Rep_847_c_0_67
Type: TC
Location: 73284 - 74528 (-)
Gene ID: Rep_847_c_0_68
Type:
Location: 74500 - 75210 (-)
Gene ID: Rep_847_c_0_69
Type: pfam
Location: 75574 - 76419 (-)
Gene ID: Rep_847_c_0_70
Type: TC
Location: 76519 - 77367 (-)
Gene ID: Rep_847_c_0_71
Type: CAZyme
Location: 77558 - 78808 (-)
Gene ID: Rep_847_c_0_72
Type:
Location: 78937 - 79401 (-)
Gene ID: Rep_847_c_0_73
Type: CAZyme
Location: 79509 - 81404 (-)
Gene ID: Rep_847_c_0_74
Type: TC
Location: 81561 - 83201 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_847_c_0_69 vegan > omnivore 1.24351 0.01052

🧭 Explore Read Mapping of CGC

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