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Cluster: Rep_836_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_836_c_39 Rep_836_c_39_1 100 2013 - GH32
TF Rep_836_c_39 Rep_836_c_39_2 2082 3170 - LacI
TC Rep_836_c_39 Rep_836_c_39_3 3206 3874 - 9.B.28.1.10
TC Rep_836_c_39 Rep_836_c_39_4 3891 4829 - 3.A.1.1.29
TC Rep_836_c_39 Rep_836_c_39_5 4842 5816 - 3.A.1.1.10
TC Rep_836_c_39 Rep_836_c_39_6 5922 7529 - 3.A.1.1.10
TC Rep_836_c_39 Rep_836_c_39_7 8145 9560 - 2.A.1.3.30
TC Rep_836_c_39 Rep_836_c_39_8 9926 10909 + 9.B.126.1.2
Gene ID: Rep_836_c_39_1
Type: CAZyme
Location: 100 - 2013 (-)
Gene ID: Rep_836_c_39_2
Type: TF
Location: 2082 - 3170 (-)
Gene ID: Rep_836_c_39_3
Type: TC
Location: 3206 - 3874 (-)
Gene ID: Rep_836_c_39_4
Type: TC
Location: 3891 - 4829 (-)
Gene ID: Rep_836_c_39_5
Type: TC
Location: 4842 - 5816 (-)
Gene ID: Rep_836_c_39_6
Type: TC
Location: 5922 - 7529 (-)
Gene ID: Rep_836_c_39_7
Type: TC
Location: 8145 - 9560 (-)
Gene ID: Rep_836_c_39_8
Type: TC
Location: 9926 - 10909 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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