Cluster: Rep_836_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan/galactan
- Genome ID: Rep_836
- CGC Family ID: CGCFAM_00583
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_836_c_24 | Rep_836_c_24_9 | 9407 | 11701 | - | GH36 |
| TC | Rep_836_c_24 | Rep_836_c_24_10 | 11883 | 12725 | + | 2.A.102.4.5 |
| pfam | Rep_836_c_24 | Rep_836_c_24_11 | 12768 | 13211 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_836_c_24 | Rep_836_c_24_12 | 13360 | 15432 | + | 2.A.36.3.2 |
Gene ID: Rep_836_c_24_9
Type: CAZyme
Location: 9407 - 11701 (-)
Type: CAZyme
Location: 9407 - 11701 (-)
Gene ID: Rep_836_c_24_10
Type: TC
Location: 11883 - 12725 (+)
Type: TC
Location: 11883 - 12725 (+)
Gene ID: Rep_836_c_24_11
Type: pfam
Location: 12768 - 13211 (-)
Type: pfam
Location: 12768 - 13211 (-)
Gene ID: Rep_836_c_24_12
Type: TC
Location: 13360 - 15432 (+)
Type: TC
Location: 13360 - 15432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium angulatum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.