Cluster: Rep_836_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_836
- CGC Family ID: CGCFAM_01936
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_836_c_21 | Rep_836_c_21_30 | 18112 | 18450 | - | 2.A.1.18.1 |
| TC | Rep_836_c_21 | Rep_836_c_21_31 | 18450 | 18689 | - | 2.A.1.18.2 |
| pfam | Rep_836_c_21 | Rep_836_c_21_32 | 18892 | 19896 | - | ADH_zinc_N | ADH_N |
| CAZyme | Rep_836_c_21 | Rep_836_c_21_33 | 20120 | 22717 | + | GH13_11 |
| pfam | Rep_836_c_21 | Rep_836_c_21_34 | 22942 | 23433 | - | Ribosomal_S9 |
| pfam | Rep_836_c_21 | Rep_836_c_21_35 | 23454 | 23990 | - | Ribosomal_L13 |
| CAZyme | Rep_836_c_21 | Rep_836_c_21_36 | 24194 | 26365 | - | GH77 |
Gene ID: Rep_836_c_21_30
Type: TC
Location: 18112 - 18450 (-)
Type: TC
Location: 18112 - 18450 (-)
Gene ID: Rep_836_c_21_31
Type: TC
Location: 18450 - 18689 (-)
Type: TC
Location: 18450 - 18689 (-)
Gene ID: Rep_836_c_21_32
Type: pfam
Location: 18892 - 19896 (-)
Type: pfam
Location: 18892 - 19896 (-)
Gene ID: Rep_836_c_21_33
Type: CAZyme
Location: 20120 - 22717 (+)
Type: CAZyme
Location: 20120 - 22717 (+)
Gene ID: Rep_836_c_21_34
Type: pfam
Location: 22942 - 23433 (-)
Type: pfam
Location: 22942 - 23433 (-)
Gene ID: Rep_836_c_21_35
Type: pfam
Location: 23454 - 23990 (-)
Type: pfam
Location: 23454 - 23990 (-)
Gene ID: Rep_836_c_21_36
Type: CAZyme
Location: 24194 - 26365 (-)
Type: CAZyme
Location: 24194 - 26365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium angulatum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.