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Cluster: Rep_836_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_836_c_9 Rep_836_c_9_4 2951 4279 + 3.A.1.1.45
TF Rep_836_c_9 Rep_836_c_9_5 4554 5573 - LacI
TC Rep_836_c_9 Rep_836_c_9_6 5937 6791 + 3.A.1.1.45
TC Rep_836_c_9 Rep_836_c_9_7 6791 7633 + 3.A.1.1.45
TC Rep_836_c_9 Rep_836_c_9_8 8111 8725 + 9.B.28.1.3
TF Rep_836_c_9 Rep_836_c_9_9 8872 9918 - LacI
CAZyme Rep_836_c_9 Rep_836_c_9_10 10030 12207 - GH77
TC Rep_836_c_9 Rep_836_c_9_11 12625 14496 + 1.A.33.1.4
Gene ID: Rep_836_c_9_4
Type: TC
Location: 2951 - 4279 (+)
Gene ID: Rep_836_c_9_5
Type: TF
Location: 4554 - 5573 (-)
Gene ID: Rep_836_c_9_6
Type: TC
Location: 5937 - 6791 (+)
Gene ID: Rep_836_c_9_7
Type: TC
Location: 6791 - 7633 (+)
Gene ID: Rep_836_c_9_8
Type: TC
Location: 8111 - 8725 (+)
Gene ID: Rep_836_c_9_9
Type: TF
Location: 8872 - 9918 (-)
Gene ID: Rep_836_c_9_10
Type: CAZyme
Location: 10030 - 12207 (-)
Gene ID: Rep_836_c_9_11
Type: TC
Location: 12625 - 14496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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