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Cluster: Rep_81_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_81_c_0 Rep_81_c_0_531 629438 630478 - GT2
CAZyme Rep_81_c_0 Rep_81_c_0_532 630511 631848 + GT4
pfam Rep_81_c_0 Rep_81_c_0_533 631892 633100 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam Rep_81_c_0 Rep_81_c_0_534 633106 634272 + Epimerase_2
CAZyme Rep_81_c_0 Rep_81_c_0_535 634285 635481 + GT4
CAZyme Rep_81_c_0 Rep_81_c_0_536 635490 636509 - GT2
CAZyme Rep_81_c_0 Rep_81_c_0_537 636502 637626 - GT4
CAZyme Rep_81_c_0 Rep_81_c_0_538 637747 638523 + GT2
TC Rep_81_c_0 Rep_81_c_0_539 638831 641320 + 9.B.144.1.4
Gene ID: Rep_81_c_0_531
Type: CAZyme
Location: 629438 - 630478 (-)
Gene ID: Rep_81_c_0_532
Type: CAZyme
Location: 630511 - 631848 (+)
Gene ID: Rep_81_c_0_533
Type: pfam
Location: 631892 - 633100 (+)
Gene ID: Rep_81_c_0_534
Type: pfam
Location: 633106 - 634272 (+)
Gene ID: Rep_81_c_0_535
Type: CAZyme
Location: 634285 - 635481 (+)
Gene ID: Rep_81_c_0_536
Type: CAZyme
Location: 635490 - 636509 (-)
Gene ID: Rep_81_c_0_537
Type: CAZyme
Location: 636502 - 637626 (-)
Gene ID: Rep_81_c_0_538
Type: CAZyme
Location: 637747 - 638523 (+)
Gene ID: Rep_81_c_0_539
Type: TC
Location: 638831 - 641320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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