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Cluster: Rep_81_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_81_c_0 Rep_81_c_0_3620 4160961 4161944 + 1.B.57.4.3
pfam Rep_81_c_0 Rep_81_c_0_3621 4161983 4163068 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC Rep_81_c_0 Rep_81_c_0_3622 4163219 4164880 - 2.A.81.1.2
STP Rep_81_c_0 Rep_81_c_0_3623 4165158 4165919 + Peptidase_M23
pfam Rep_81_c_0 Rep_81_c_0_3624 4165944 4166411 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme Rep_81_c_0 Rep_81_c_0_3625 4166587 4167474 + GH73
pfam Rep_81_c_0 Rep_81_c_0_3626 4167491 4168021 + DUF4199
CAZyme Rep_81_c_0 Rep_81_c_0_3627 4168038 4168988 + GT2
Gene ID: Rep_81_c_0_3620
Type: TC
Location: 4160961 - 4161944 (+)
Gene ID: Rep_81_c_0_3621
Type: pfam
Location: 4161983 - 4163068 (+)
Gene ID: Rep_81_c_0_3622
Type: TC
Location: 4163219 - 4164880 (-)
Gene ID: Rep_81_c_0_3623
Type: STP
Location: 4165158 - 4165919 (+)
Gene ID: Rep_81_c_0_3624
Type: pfam
Location: 4165944 - 4166411 (-)
Gene ID: Rep_81_c_0_3625
Type: CAZyme
Location: 4166587 - 4167474 (+)
Gene ID: Rep_81_c_0_3626
Type: pfam
Location: 4167491 - 4168021 (+)
Gene ID: Rep_81_c_0_3627
Type: CAZyme
Location: 4168038 - 4168988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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