Cluster: Rep_81_CGC19
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_81
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2109 | 2406750 | 2408756 | + | GH13_8 |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2110 | 2408778 | 2410733 | + | GH133 |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2111 | 2410845 | 2412131 | + | GT4 |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2112 | 2412159 | 2413490 | + | GH57 |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2113 | 2413776 | 2415725 | + | GT3 |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2114 | 2415712 | 2418060 | + | GT35 |
| pfam | Rep_81_c_0 | Rep_81_c_0_2115 | 2418377 | 2418952 | + | TK |
| TF | Rep_81_c_0 | Rep_81_c_0_2116 | 2419074 | 2419628 | + | GerE |
| CAZyme | Rep_81_c_0 | Rep_81_c_0_2117 | 2419732 | 2422467 | - | GH92 |
| NULL(UNKNOWN) | Rep_81_c_0 | Rep_81_c_0_2118 | 2422884 | 2422982 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_81_c_0 | Rep_81_c_0_2119 | 2422975 | 2424210 | + | PagL |
| TC | Rep_81_c_0 | Rep_81_c_0_2120 | 2424365 | 2429332 | + | 2.A.16.2.2 |
| NULL(UNKNOWN) | Rep_81_c_0 | Rep_81_c_0_2121 | 2429800 | 2430135 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_81_c_0 | Rep_81_c_0_2122 | 2430447 | 2432366 | - | 1.A.33.1.2 |
| NULL(UNKNOWN) | Rep_81_c_0 | Rep_81_c_0_2123 | 2432543 | 2432662 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_81_c_0 | Rep_81_c_0_2124 | 2432689 | 2433966 | + | PALP |
| TC | Rep_81_c_0 | Rep_81_c_0_2125 | 2434261 | 2435553 | + | 9.B.126.2.1 |
| pfam | Rep_81_c_0 | Rep_81_c_0_2126 | 2435645 | 2436022 | + | START_2 |
| TC | Rep_81_c_0 | Rep_81_c_0_2127 | 2436148 | 2437590 | + | 1.B.42.1.13 |
Gene ID: Rep_81_c_0_2109
Type: CAZyme
Location: 2406750 - 2408756 (+)
Type: CAZyme
Location: 2406750 - 2408756 (+)
Gene ID: Rep_81_c_0_2110
Type: CAZyme
Location: 2408778 - 2410733 (+)
Type: CAZyme
Location: 2408778 - 2410733 (+)
Gene ID: Rep_81_c_0_2111
Type: CAZyme
Location: 2410845 - 2412131 (+)
Type: CAZyme
Location: 2410845 - 2412131 (+)
Gene ID: Rep_81_c_0_2112
Type: CAZyme
Location: 2412159 - 2413490 (+)
Type: CAZyme
Location: 2412159 - 2413490 (+)
Gene ID: Rep_81_c_0_2113
Type: CAZyme
Location: 2413776 - 2415725 (+)
Type: CAZyme
Location: 2413776 - 2415725 (+)
Gene ID: Rep_81_c_0_2114
Type: CAZyme
Location: 2415712 - 2418060 (+)
Type: CAZyme
Location: 2415712 - 2418060 (+)
Gene ID: Rep_81_c_0_2115
Type: pfam
Location: 2418377 - 2418952 (+)
Type: pfam
Location: 2418377 - 2418952 (+)
Gene ID: Rep_81_c_0_2116
Type: TF
Location: 2419074 - 2419628 (+)
Type: TF
Location: 2419074 - 2419628 (+)
Gene ID: Rep_81_c_0_2117
Type: CAZyme
Location: 2419732 - 2422467 (-)
Type: CAZyme
Location: 2419732 - 2422467 (-)
Gene ID: Rep_81_c_0_2118
Type:
Location: 2422884 - 2422982 (+)
Type:
Location: 2422884 - 2422982 (+)
Gene ID: Rep_81_c_0_2119
Type: pfam
Location: 2422975 - 2424210 (+)
Type: pfam
Location: 2422975 - 2424210 (+)
Gene ID: Rep_81_c_0_2120
Type: TC
Location: 2424365 - 2429332 (+)
Type: TC
Location: 2424365 - 2429332 (+)
Gene ID: Rep_81_c_0_2121
Type:
Location: 2429800 - 2430135 (-)
Type:
Location: 2429800 - 2430135 (-)
Gene ID: Rep_81_c_0_2122
Type: TC
Location: 2430447 - 2432366 (-)
Type: TC
Location: 2430447 - 2432366 (-)
Gene ID: Rep_81_c_0_2123
Type:
Location: 2432543 - 2432662 (+)
Type:
Location: 2432543 - 2432662 (+)
Gene ID: Rep_81_c_0_2124
Type: STP
Location: 2432689 - 2433966 (+)
Type: STP
Location: 2432689 - 2433966 (+)
Gene ID: Rep_81_c_0_2125
Type: TC
Location: 2434261 - 2435553 (+)
Type: TC
Location: 2434261 - 2435553 (+)
Gene ID: Rep_81_c_0_2126
Type: pfam
Location: 2435645 - 2436022 (+)
Type: pfam
Location: 2435645 - 2436022 (+)
Gene ID: Rep_81_c_0_2127
Type: TC
Location: 2436148 - 2437590 (+)
Type: TC
Location: 2436148 - 2437590 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter splanchnicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.