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Cluster: Rep_81_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_81_c_0 Rep_81_c_0_1947 2246412 2247512 + GH43_26
CAZyme Rep_81_c_0 Rep_81_c_0_1948 2247707 2249173 + GH125
TC Rep_81_c_0 Rep_81_c_0_1949 2249251 2250411 + 2.A.1.7.16
TC Rep_81_c_0 Rep_81_c_0_1950 2250503 2251300 - 2.A.64.1.3
pfam Rep_81_c_0 Rep_81_c_0_1951 2251319 2251510 - TatA_B_E
TC Rep_81_c_0 Rep_81_c_0_1952 2251763 2253658 + 3.A.6.1.1
Gene ID: Rep_81_c_0_1947
Type: CAZyme
Location: 2246412 - 2247512 (+)
Gene ID: Rep_81_c_0_1948
Type: CAZyme
Location: 2247707 - 2249173 (+)
Gene ID: Rep_81_c_0_1949
Type: TC
Location: 2249251 - 2250411 (+)
Gene ID: Rep_81_c_0_1950
Type: TC
Location: 2250503 - 2251300 (-)
Gene ID: Rep_81_c_0_1951
Type: pfam
Location: 2251319 - 2251510 (-)
Gene ID: Rep_81_c_0_1952
Type: TC
Location: 2251763 - 2253658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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