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Cluster: Rep_81_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_81_c_0 Rep_81_c_0_1860 2147487 2150591 + 1.B.14.6.1
TC Rep_81_c_0 Rep_81_c_0_1861 2150603 2152063 + 8.A.46.3.3
CAZyme Rep_81_c_0 Rep_81_c_0_1862 2152172 2152822 + GT83
NULL(UNKNOWN) Rep_81_c_0 Rep_81_c_0_1863 2152871 2153488 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_81_c_0 Rep_81_c_0_1864 2153454 2154011 - 2.A.107.1.2
Gene ID: Rep_81_c_0_1860
Type: TC
Location: 2147487 - 2150591 (+)
Gene ID: Rep_81_c_0_1861
Type: TC
Location: 2150603 - 2152063 (+)
Gene ID: Rep_81_c_0_1862
Type: CAZyme
Location: 2152172 - 2152822 (+)
Gene ID: Rep_81_c_0_1863
Type:
Location: 2152871 - 2153488 (+)
Gene ID: Rep_81_c_0_1864
Type: TC
Location: 2153454 - 2154011 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_81_c_0_1861 vegetarian > omnivore 1.14713 0.00178

🧭 Explore Read Mapping of CGC

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