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Cluster: Rep_81_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_81_c_0 Rep_81_c_0_1499 1694237 1696621 + GH51_1
CAZyme Rep_81_c_0 Rep_81_c_0_1500 1696659 1697951 + GH146
pfam Rep_81_c_0 Rep_81_c_0_1501 1697923 1698999 + DUF4986 | DUF6805 | Glyco_hydro127M
NULL(UNKNOWN) Rep_81_c_0 Rep_81_c_0_1502 1699216 1699875 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_81_c_0 Rep_81_c_0_1503 1699906 1701231 + 3.A.5.1.1
pfam Rep_81_c_0 Rep_81_c_0_1504 1701269 1702150 + THF_DHG_CYH | THF_DHG_CYH_C
TC Rep_81_c_0 Rep_81_c_0_1505 1702388 1703443 + 9.B.156.3.1
pfam Rep_81_c_0 Rep_81_c_0_1506 1703471 1704520 + tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
NULL(UNKNOWN) Rep_81_c_0 Rep_81_c_0_1507 1704585 1705022 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_81_c_0 Rep_81_c_0_1508 1705782 1706414 + 2.A.95.1.4
Gene ID: Rep_81_c_0_1499
Type: CAZyme
Location: 1694237 - 1696621 (+)
Gene ID: Rep_81_c_0_1500
Type: CAZyme
Location: 1696659 - 1697951 (+)
Gene ID: Rep_81_c_0_1501
Type: pfam
Location: 1697923 - 1698999 (+)
Gene ID: Rep_81_c_0_1502
Type:
Location: 1699216 - 1699875 (+)
Gene ID: Rep_81_c_0_1503
Type: TC
Location: 1699906 - 1701231 (+)
Gene ID: Rep_81_c_0_1504
Type: pfam
Location: 1701269 - 1702150 (+)
Gene ID: Rep_81_c_0_1505
Type: TC
Location: 1702388 - 1703443 (+)
Gene ID: Rep_81_c_0_1506
Type: pfam
Location: 1703471 - 1704520 (+)
Gene ID: Rep_81_c_0_1507
Type:
Location: 1704585 - 1705022 (+)
Gene ID: Rep_81_c_0_1508
Type: TC
Location: 1705782 - 1706414 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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