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Cluster: Rep_81_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_81_c_0 Rep_81_c_0_142 150845 151705 - 2.A.115.1.1
pfam Rep_81_c_0 Rep_81_c_0_143 151733 153424 - tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
pfam Rep_81_c_0 Rep_81_c_0_144 153531 155504 + Porin_10
CAZyme Rep_81_c_0 Rep_81_c_0_145 155528 156916 + GH23
NULL(UNKNOWN) Rep_81_c_0 Rep_81_c_0_146 157019 157765 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_81_c_0 Rep_81_c_0_147 157983 158927 - 9.A.8.1.6
TC Rep_81_c_0 Rep_81_c_0_148 158975 160348 - 9.A.8.1.6
NULL(UNKNOWN) Rep_81_c_0 Rep_81_c_0_149 160377 161108 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_81_c_0 Rep_81_c_0_150 161196 163337 - 2.A.37.2.5
pfam Rep_81_c_0 Rep_81_c_0_151 163528 164673 + NPCBM_assoc
TC Rep_81_c_0 Rep_81_c_0_152 164677 165417 + 3.A.1.131.1
Gene ID: Rep_81_c_0_142
Type: TC
Location: 150845 - 151705 (-)
Gene ID: Rep_81_c_0_143
Type: pfam
Location: 151733 - 153424 (-)
Gene ID: Rep_81_c_0_144
Type: pfam
Location: 153531 - 155504 (+)
Gene ID: Rep_81_c_0_145
Type: CAZyme
Location: 155528 - 156916 (+)
Gene ID: Rep_81_c_0_146
Type:
Location: 157019 - 157765 (+)
Gene ID: Rep_81_c_0_147
Type: TC
Location: 157983 - 158927 (-)
Gene ID: Rep_81_c_0_148
Type: TC
Location: 158975 - 160348 (-)
Gene ID: Rep_81_c_0_149
Type:
Location: 160377 - 161108 (-)
Gene ID: Rep_81_c_0_150
Type: TC
Location: 161196 - 163337 (-)
Gene ID: Rep_81_c_0_151
Type: pfam
Location: 163528 - 164673 (+)
Gene ID: Rep_81_c_0_152
Type: TC
Location: 164677 - 165417 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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