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Cluster: Rep_816_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_816_c_14 Rep_816_c_14_48 49081 50211 + GT4
pfam Rep_816_c_14 Rep_816_c_14_49 50292 51059 + ABC2_membrane
TC Rep_816_c_14 Rep_816_c_14_50 51064 51843 + 3.A.1.103.4
pfam Rep_816_c_14 Rep_816_c_14_51 51857 52609 - Methyltransf_21
CAZyme Rep_816_c_14 Rep_816_c_14_52 52766 54256 + GT4
CAZyme Rep_816_c_14 Rep_816_c_14_53 54352 55560 + GT4
pfam Rep_816_c_14 Rep_816_c_14_54 55590 57080 - PMT_2
CAZyme Rep_816_c_14 Rep_816_c_14_55 57277 58785 + GT83
CAZyme Rep_816_c_14 Rep_816_c_14_56 58787 60208 + GT83
pfam Rep_816_c_14 Rep_816_c_14_57 60513 61712 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC Rep_816_c_14 Rep_816_c_14_58 61815 63434 + 4.C.1.1.4
Gene ID: Rep_816_c_14_48
Type: CAZyme
Location: 49081 - 50211 (+)
Gene ID: Rep_816_c_14_49
Type: pfam
Location: 50292 - 51059 (+)
Gene ID: Rep_816_c_14_50
Type: TC
Location: 51064 - 51843 (+)
Gene ID: Rep_816_c_14_51
Type: pfam
Location: 51857 - 52609 (-)
Gene ID: Rep_816_c_14_52
Type: CAZyme
Location: 52766 - 54256 (+)
Gene ID: Rep_816_c_14_53
Type: CAZyme
Location: 54352 - 55560 (+)
Gene ID: Rep_816_c_14_54
Type: pfam
Location: 55590 - 57080 (-)
Gene ID: Rep_816_c_14_55
Type: CAZyme
Location: 57277 - 58785 (+)
Gene ID: Rep_816_c_14_56
Type: CAZyme
Location: 58787 - 60208 (+)
Gene ID: Rep_816_c_14_57
Type: pfam
Location: 60513 - 61712 (+)
Gene ID: Rep_816_c_14_58
Type: TC
Location: 61815 - 63434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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