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Cluster: Rep_816_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_816_c_45 Rep_816_c_45_2 317 1612 + 3.A.9.1.1
pfam Rep_816_c_45 Rep_816_c_45_3 1735 2424 - FAA_hydrolase
TC Rep_816_c_45 Rep_816_c_45_4 2469 4271 - 3.A.1.106.1
pfam Rep_816_c_45 Rep_816_c_45_5 4391 5404 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme Rep_816_c_45 Rep_816_c_45_6 5614 6564 + GT9
pfam Rep_816_c_45 Rep_816_c_45_7 6554 7090 - PNK3P | Hydrolase_like | HAD_2
STP Rep_816_c_45 Rep_816_c_45_8 7087 7680 - SIS
CAZyme Rep_816_c_45 Rep_816_c_45_9 7759 8820 - GT9
Gene ID: Rep_816_c_45_2
Type: TC
Location: 317 - 1612 (+)
Gene ID: Rep_816_c_45_3
Type: pfam
Location: 1735 - 2424 (-)
Gene ID: Rep_816_c_45_4
Type: TC
Location: 2469 - 4271 (-)
Gene ID: Rep_816_c_45_5
Type: pfam
Location: 4391 - 5404 (-)
Gene ID: Rep_816_c_45_6
Type: CAZyme
Location: 5614 - 6564 (+)
Gene ID: Rep_816_c_45_7
Type: pfam
Location: 6554 - 7090 (-)
Gene ID: Rep_816_c_45_8
Type: STP
Location: 7087 - 7680 (-)
Gene ID: Rep_816_c_45_9
Type: CAZyme
Location: 7759 - 8820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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