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Cluster: Rep_816_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_816_c_24 Rep_816_c_24_17 15674 16642 + 2.A.89.2.2
pfam Rep_816_c_24 Rep_816_c_24_18 16645 17175 + Ni_hydr_CYTB
TC Rep_816_c_24 Rep_816_c_24_19 17246 20485 - 2.A.6.1.15
TC Rep_816_c_24 Rep_816_c_24_20 20489 21706 - 2.A.6.1.2
pfam Rep_816_c_24 Rep_816_c_24_21 21741 22019 - Trns_repr_metal
pfam Rep_816_c_24 Rep_816_c_24_22 22103 22381 + Trns_repr_metal
TC Rep_816_c_24 Rep_816_c_24_23 22391 23668 + 2.A.4.3.9
STP Rep_816_c_24 Rep_816_c_24_24 23838 25046 + GAF | HATPase_c
CAZyme Rep_816_c_24 Rep_816_c_24_25 25501 27672 - GT2
pfam Rep_816_c_24 Rep_816_c_24_26 27660 28931 - MdoG
TC Rep_816_c_24 Rep_816_c_24_27 30054 31277 - 9.B.34.1.3
Gene ID: Rep_816_c_24_17
Type: TC
Location: 15674 - 16642 (+)
Gene ID: Rep_816_c_24_18
Type: pfam
Location: 16645 - 17175 (+)
Gene ID: Rep_816_c_24_19
Type: TC
Location: 17246 - 20485 (-)
Gene ID: Rep_816_c_24_20
Type: TC
Location: 20489 - 21706 (-)
Gene ID: Rep_816_c_24_21
Type: pfam
Location: 21741 - 22019 (-)
Gene ID: Rep_816_c_24_22
Type: pfam
Location: 22103 - 22381 (+)
Gene ID: Rep_816_c_24_23
Type: TC
Location: 22391 - 23668 (+)
Gene ID: Rep_816_c_24_24
Type: STP
Location: 23838 - 25046 (+)
Gene ID: Rep_816_c_24_25
Type: CAZyme
Location: 25501 - 27672 (-)
Gene ID: Rep_816_c_24_26
Type: pfam
Location: 27660 - 28931 (-)
Gene ID: Rep_816_c_24_27
Type: TC
Location: 30054 - 31277 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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