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Cluster: Rep_814_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_814_c_80 Rep_814_c_80_293 318778 319497 + 1.B.39.1.6
STP Rep_814_c_80 Rep_814_c_80_294 319563 319775 - HMA
TC Rep_814_c_80 Rep_814_c_80_295 319920 322142 + 3.A.3.5.34
TF Rep_814_c_80 Rep_814_c_80_296 322139 322606 + MerR
peptidase Rep_814_c_80 Rep_814_c_80_297 322682 323551 + S33.UPW
CAZyme Rep_814_c_80 Rep_814_c_80_298 323619 325253 + AA3_2
TC Rep_814_c_80 Rep_814_c_80_299 325499 326269 + 3.A.1.4.10
TC Rep_814_c_80 Rep_814_c_80_300 326364 327104 + 3.A.1.4.8
pfam Rep_814_c_80 Rep_814_c_80_301 327180 328388 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC Rep_814_c_80 Rep_814_c_80_302 328470 329354 + 3.A.1.4.3
TC Rep_814_c_80 Rep_814_c_80_303 329351 330355 + 3.A.1.4.7
NULL(UNKNOWN) Rep_814_c_80 Rep_814_c_80_304 330602 330826 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_814_c_80 Rep_814_c_80_305 330903 331382 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_814_c_80 Rep_814_c_80_306 331406 332164 + 2.A.102.3.2
Gene ID: Rep_814_c_80_293
Type: TC
Location: 318778 - 319497 (+)
Gene ID: Rep_814_c_80_294
Type: STP
Location: 319563 - 319775 (-)
Gene ID: Rep_814_c_80_295
Type: TC
Location: 319920 - 322142 (+)
Gene ID: Rep_814_c_80_296
Type: TF
Location: 322139 - 322606 (+)
Gene ID: Rep_814_c_80_297
Type: peptidase
Location: 322682 - 323551 (+)
Gene ID: Rep_814_c_80_298
Type: CAZyme
Location: 323619 - 325253 (+)
Gene ID: Rep_814_c_80_299
Type: TC
Location: 325499 - 326269 (+)
Gene ID: Rep_814_c_80_300
Type: TC
Location: 326364 - 327104 (+)
Gene ID: Rep_814_c_80_301
Type: pfam
Location: 327180 - 328388 (+)
Gene ID: Rep_814_c_80_302
Type: TC
Location: 328470 - 329354 (+)
Gene ID: Rep_814_c_80_303
Type: TC
Location: 329351 - 330355 (+)
Gene ID: Rep_814_c_80_304
Type:
Location: 330602 - 330826 (-)
Gene ID: Rep_814_c_80_305
Type:
Location: 330903 - 331382 (+)
Gene ID: Rep_814_c_80_306
Type: TC
Location: 331406 - 332164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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