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Cluster: Rep_814_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_814_c_80 Rep_814_c_80_148 163854 164897 + 9.B.157.1.3
TC Rep_814_c_80 Rep_814_c_80_149 165137 166183 + 9.B.157.1.3
pfam Rep_814_c_80 Rep_814_c_80_150 166200 166712 + MreD
peptidase Rep_814_c_80 Rep_814_c_80_151 166755 169160 + X52.001
TC Rep_814_c_80 Rep_814_c_80_152 169184 170335 + 2.A.103.1.2
TC Rep_814_c_80 Rep_814_c_80_153 170372 172060 - 4.C.1.1.4
TF Rep_814_c_80 Rep_814_c_80_154 172513 173451 + HTH_1
TC Rep_814_c_80 Rep_814_c_80_155 173525 176155 - 3.A.7.7.1
pfam Rep_814_c_80 Rep_814_c_80_156 176409 176789 - Thioredoxin
TC Rep_814_c_80 Rep_814_c_80_157 176852 178057 - 3.A.11.1.3
CAZyme Rep_814_c_80 Rep_814_c_80_158 178083 179270 - CBM50
Gene ID: Rep_814_c_80_148
Type: TC
Location: 163854 - 164897 (+)
Gene ID: Rep_814_c_80_149
Type: TC
Location: 165137 - 166183 (+)
Gene ID: Rep_814_c_80_150
Type: pfam
Location: 166200 - 166712 (+)
Gene ID: Rep_814_c_80_151
Type: peptidase
Location: 166755 - 169160 (+)
Gene ID: Rep_814_c_80_152
Type: TC
Location: 169184 - 170335 (+)
Gene ID: Rep_814_c_80_153
Type: TC
Location: 170372 - 172060 (-)
Gene ID: Rep_814_c_80_154
Type: TF
Location: 172513 - 173451 (+)
Gene ID: Rep_814_c_80_155
Type: TC
Location: 173525 - 176155 (-)
Gene ID: Rep_814_c_80_156
Type: pfam
Location: 176409 - 176789 (-)
Gene ID: Rep_814_c_80_157
Type: TC
Location: 176852 - 178057 (-)
Gene ID: Rep_814_c_80_158
Type: CAZyme
Location: 178083 - 179270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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