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Cluster: Rep_814_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_814_c_78 Rep_814_c_78_23 24208 25077 + 3.A.1.4.7
TC Rep_814_c_78 Rep_814_c_78_24 25074 26108 + 3.A.1.4.7
TC Rep_814_c_78 Rep_814_c_78_25 26105 26878 + 3.A.1.4.7
TC Rep_814_c_78 Rep_814_c_78_26 26871 27572 + 3.A.1.4.7
TC Rep_814_c_78 Rep_814_c_78_27 27576 28742 - 3.A.1.4.7
TF Rep_814_c_78 Rep_814_c_78_28 28880 29857 - HTH_1
pfam Rep_814_c_78 Rep_814_c_78_29 29977 31203 + FAD_binding_3
CAZyme Rep_814_c_78 Rep_814_c_78_30 31181 32290 - GH114
Gene ID: Rep_814_c_78_23
Type: TC
Location: 24208 - 25077 (+)
Gene ID: Rep_814_c_78_24
Type: TC
Location: 25074 - 26108 (+)
Gene ID: Rep_814_c_78_25
Type: TC
Location: 26105 - 26878 (+)
Gene ID: Rep_814_c_78_26
Type: TC
Location: 26871 - 27572 (+)
Gene ID: Rep_814_c_78_27
Type: TC
Location: 27576 - 28742 (-)
Gene ID: Rep_814_c_78_28
Type: TF
Location: 28880 - 29857 (-)
Gene ID: Rep_814_c_78_29
Type: pfam
Location: 29977 - 31203 (+)
Gene ID: Rep_814_c_78_30
Type: CAZyme
Location: 31181 - 32290 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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