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Cluster: Rep_814_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_814_c_78 Rep_814_c_78_7 7907 9520 + GT4
TC Rep_814_c_78 Rep_814_c_78_8 9520 10890 + 2.A.66.6.2
STP Rep_814_c_78 Rep_814_c_78_9 11402 12670 + Pyr_redox
TC Rep_814_c_78 Rep_814_c_78_10 12783 13706 + 3.A.1.3.4
TC Rep_814_c_78 Rep_814_c_78_11 13779 14528 - 3.A.1.3.26
TC Rep_814_c_78 Rep_814_c_78_12 14525 15217 - 3.A.1.3.26
TC Rep_814_c_78 Rep_814_c_78_13 15220 15915 - 3.A.1.3.19
TC Rep_814_c_78 Rep_814_c_78_14 15964 16809 - 3.A.1.3.27
Gene ID: Rep_814_c_78_7
Type: CAZyme
Location: 7907 - 9520 (+)
Gene ID: Rep_814_c_78_8
Type: TC
Location: 9520 - 10890 (+)
Gene ID: Rep_814_c_78_9
Type: STP
Location: 11402 - 12670 (+)
Gene ID: Rep_814_c_78_10
Type: TC
Location: 12783 - 13706 (+)
Gene ID: Rep_814_c_78_11
Type: TC
Location: 13779 - 14528 (-)
Gene ID: Rep_814_c_78_12
Type: TC
Location: 14525 - 15217 (-)
Gene ID: Rep_814_c_78_13
Type: TC
Location: 15220 - 15915 (-)
Gene ID: Rep_814_c_78_14
Type: TC
Location: 15964 - 16809 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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