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Cluster: Rep_814_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_814_c_69 Rep_814_c_69_92 107992 109296 + 2.A.40.7.6
NULL(UNKNOWN) Rep_814_c_69 Rep_814_c_69_93 109584 110846 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_814_c_69 Rep_814_c_69_94 111142 111924 + DUF4397
TC Rep_814_c_69 Rep_814_c_69_95 111989 114430 + 2.A.21.9.1
pfam Rep_814_c_69 Rep_814_c_69_96 114482 115750 + AI-2E_transport | AI-2E_transport
NULL(UNKNOWN) Rep_814_c_69 Rep_814_c_69_97 115978 116409 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_814_c_69 Rep_814_c_69_98 116417 117472 + GT4
pfam Rep_814_c_69 Rep_814_c_69_99 117566 118102 + PAP2 | PAP2_3
pfam Rep_814_c_69 Rep_814_c_69_100 118112 118906 - DUF2334
CAZyme Rep_814_c_69 Rep_814_c_69_101 118936 120147 - GT4
Gene ID: Rep_814_c_69_92
Type: TC
Location: 107992 - 109296 (+)
Gene ID: Rep_814_c_69_93
Type:
Location: 109584 - 110846 (-)
Gene ID: Rep_814_c_69_94
Type: pfam
Location: 111142 - 111924 (+)
Gene ID: Rep_814_c_69_95
Type: TC
Location: 111989 - 114430 (+)
Gene ID: Rep_814_c_69_96
Type: pfam
Location: 114482 - 115750 (+)
Gene ID: Rep_814_c_69_97
Type:
Location: 115978 - 116409 (+)
Gene ID: Rep_814_c_69_98
Type: CAZyme
Location: 116417 - 117472 (+)
Gene ID: Rep_814_c_69_99
Type: pfam
Location: 117566 - 118102 (+)
Gene ID: Rep_814_c_69_100
Type: pfam
Location: 118112 - 118906 (-)
Gene ID: Rep_814_c_69_101
Type: CAZyme
Location: 118936 - 120147 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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