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Cluster: Rep_814_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_814_c_51 Rep_814_c_51_42 40756 41805 + GH3
pfam Rep_814_c_51 Rep_814_c_51_43 41882 42457 - EFP | EFP_N | Elong-fact-P_C
CAZyme Rep_814_c_51 Rep_814_c_51_44 42574 43767 - GT104
pfam Rep_814_c_51 Rep_814_c_51_45 43859 45832 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
TC Rep_814_c_51 Rep_814_c_51_46 45900 46475 + 4.F.1.1.8
TC Rep_814_c_51 Rep_814_c_51_47 47304 48434 + 2.A.1.36.2
TF Rep_814_c_51 Rep_814_c_51_48 48850 49563 + Trans_reg_C
CAZyme Rep_814_c_51 Rep_814_c_51_49 49547 51226 + CBM50
Gene ID: Rep_814_c_51_42
Type: CAZyme
Location: 40756 - 41805 (+)
Gene ID: Rep_814_c_51_43
Type: pfam
Location: 41882 - 42457 (-)
Gene ID: Rep_814_c_51_44
Type: CAZyme
Location: 42574 - 43767 (-)
Gene ID: Rep_814_c_51_45
Type: pfam
Location: 43859 - 45832 (+)
Gene ID: Rep_814_c_51_46
Type: TC
Location: 45900 - 46475 (+)
Gene ID: Rep_814_c_51_47
Type: TC
Location: 47304 - 48434 (+)
Gene ID: Rep_814_c_51_48
Type: TF
Location: 48850 - 49563 (+)
Gene ID: Rep_814_c_51_49
Type: CAZyme
Location: 49547 - 51226 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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