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Cluster: Rep_814_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_814_c_32 Rep_814_c_32_48 51500 53515 - GT107
CAZyme Rep_814_c_32 Rep_814_c_32_49 53516 54301 - GT4
TC Rep_814_c_32 Rep_814_c_32_50 54818 55984 + 1.B.18.2.4
pfam Rep_814_c_32 Rep_814_c_32_51 56193 58844 + Methyltransf_21 | DUF4214
CAZyme Rep_814_c_32 Rep_814_c_32_52 58844 61876 + GT4 | GT4
pfam Rep_814_c_32 Rep_814_c_32_53 61953 62987 + Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam Rep_814_c_32 Rep_814_c_32_54 62991 63884 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme Rep_814_c_32 Rep_814_c_32_55 63881 64996 + GT4
pfam Rep_814_c_32 Rep_814_c_32_56 65065 65736 + Hexapep
CAZyme Rep_814_c_32 Rep_814_c_32_57 65867 67162 - GT4
TC Rep_814_c_32 Rep_814_c_32_58 67245 67898 - 3.A.1.101.3
TC Rep_814_c_32 Rep_814_c_32_59 67895 68686 - 3.A.1.101.3
TC Rep_814_c_32 Rep_814_c_32_60 68705 69751 - 8.A.4.2.1
TC Rep_814_c_32 Rep_814_c_32_61 70245 71453 + 9.A.41.1.3
Gene ID: Rep_814_c_32_48
Type: CAZyme
Location: 51500 - 53515 (-)
Gene ID: Rep_814_c_32_49
Type: CAZyme
Location: 53516 - 54301 (-)
Gene ID: Rep_814_c_32_50
Type: TC
Location: 54818 - 55984 (+)
Gene ID: Rep_814_c_32_51
Type: pfam
Location: 56193 - 58844 (+)
Gene ID: Rep_814_c_32_52
Type: CAZyme
Location: 58844 - 61876 (+)
Gene ID: Rep_814_c_32_53
Type: pfam
Location: 61953 - 62987 (+)
Gene ID: Rep_814_c_32_54
Type: pfam
Location: 62991 - 63884 (+)
Gene ID: Rep_814_c_32_55
Type: CAZyme
Location: 63881 - 64996 (+)
Gene ID: Rep_814_c_32_56
Type: pfam
Location: 65065 - 65736 (+)
Gene ID: Rep_814_c_32_57
Type: CAZyme
Location: 65867 - 67162 (-)
Gene ID: Rep_814_c_32_58
Type: TC
Location: 67245 - 67898 (-)
Gene ID: Rep_814_c_32_59
Type: TC
Location: 67895 - 68686 (-)
Gene ID: Rep_814_c_32_60
Type: TC
Location: 68705 - 69751 (-)
Gene ID: Rep_814_c_32_61
Type: TC
Location: 70245 - 71453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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