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Cluster: Rep_814_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_814_c_30 Rep_814_c_30_91 87088 88947 - 9.B.34.1.1
pfam Rep_814_c_30 Rep_814_c_30_92 89336 89833 + FliL
pfam Rep_814_c_30 Rep_814_c_30_93 89835 90845 + FliMN_C | FliM
TC Rep_814_c_30 Rep_814_c_30_94 90835 91290 + 3.A.6.2.1
pfam Rep_814_c_30 Rep_814_c_30_95 91363 91764 + FliO
TC Rep_814_c_30 Rep_814_c_30_96 91761 92510 + 3.A.6.2.1
TC Rep_814_c_30 Rep_814_c_30_97 92530 92799 + 3.A.6.2.1
TC Rep_814_c_30 Rep_814_c_30_98 92833 93627 + 3.A.6.2.1
pfam Rep_814_c_30 Rep_814_c_30_99 93713 94441 + adh_short | KR | adh_short_C2
TC Rep_814_c_30 Rep_814_c_30_100 94602 95345 - 9.B.143.3.6
pfam Rep_814_c_30 Rep_814_c_30_101 95413 96372 - Flagellin_N
pfam Rep_814_c_30 Rep_814_c_30_102 96439 98376 - Flg_bb_rod | Flg_bbr_C | flgK_1st_1 | FlgK_2nd | FlgK_D1
CAZyme Rep_814_c_30 Rep_814_c_30_103 98491 99576 - GH73
Gene ID: Rep_814_c_30_91
Type: TC
Location: 87088 - 88947 (-)
Gene ID: Rep_814_c_30_92
Type: pfam
Location: 89336 - 89833 (+)
Gene ID: Rep_814_c_30_93
Type: pfam
Location: 89835 - 90845 (+)
Gene ID: Rep_814_c_30_94
Type: TC
Location: 90835 - 91290 (+)
Gene ID: Rep_814_c_30_95
Type: pfam
Location: 91363 - 91764 (+)
Gene ID: Rep_814_c_30_96
Type: TC
Location: 91761 - 92510 (+)
Gene ID: Rep_814_c_30_97
Type: TC
Location: 92530 - 92799 (+)
Gene ID: Rep_814_c_30_98
Type: TC
Location: 92833 - 93627 (+)
Gene ID: Rep_814_c_30_99
Type: pfam
Location: 93713 - 94441 (+)
Gene ID: Rep_814_c_30_100
Type: TC
Location: 94602 - 95345 (-)
Gene ID: Rep_814_c_30_101
Type: pfam
Location: 95413 - 96372 (-)
Gene ID: Rep_814_c_30_102
Type: pfam
Location: 96439 - 98376 (-)
Gene ID: Rep_814_c_30_103
Type: CAZyme
Location: 98491 - 99576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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