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Cluster: Rep_814_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_814_c_18 Rep_814_c_18_97 108006 108767 + GH23
pfam Rep_814_c_18 Rep_814_c_18_98 108834 109700 + 2OG-FeII_Oxy_3
TC Rep_814_c_18 Rep_814_c_18_99 109714 110307 + 2.A.95.1.5
STP Rep_814_c_18 Rep_814_c_18_100 110373 110921 - Pribosyltran
TC Rep_814_c_18 Rep_814_c_18_101 110989 112404 - 3.A.5.1.1
TC Rep_814_c_18 Rep_814_c_18_102 112572 113486 + 9.B.14.3.5
NULL(UNKNOWN) Rep_814_c_18 Rep_814_c_18_103 113532 113798 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_814_c_18 Rep_814_c_18_104 113795 115834 + 2.A.21.9.1
Gene ID: Rep_814_c_18_97
Type: CAZyme
Location: 108006 - 108767 (+)
Gene ID: Rep_814_c_18_98
Type: pfam
Location: 108834 - 109700 (+)
Gene ID: Rep_814_c_18_99
Type: TC
Location: 109714 - 110307 (+)
Gene ID: Rep_814_c_18_100
Type: STP
Location: 110373 - 110921 (-)
Gene ID: Rep_814_c_18_101
Type: TC
Location: 110989 - 112404 (-)
Gene ID: Rep_814_c_18_102
Type: TC
Location: 112572 - 113486 (+)
Gene ID: Rep_814_c_18_103
Type:
Location: 113532 - 113798 (+)
Gene ID: Rep_814_c_18_104
Type: TC
Location: 113795 - 115834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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