Cluster: Rep_807_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- CGC Family ID: CGCFAM_04102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_8 | Rep_807_c_8_2 | 854 | 2038 | - | 3.A.1.115.2 |
| TC | Rep_807_c_8 | Rep_807_c_8_3 | 2035 | 2781 | - | 3.A.1.115.1 |
| peptidase | Rep_807_c_8 | Rep_807_c_8_4 | 2778 | 4304 | - | S33.UPW |
| TC | Rep_807_c_8 | Rep_807_c_8_5 | 4373 | 5575 | - | 9.B.34.1.4 |
| pfam | Rep_807_c_8 | Rep_807_c_8_6 | 5730 | 6257 | + | DUF1203 |
| CAZyme | Rep_807_c_8 | Rep_807_c_8_7 | 6449 | 7615 | + | AA10 | CBM73 |
Gene ID: Rep_807_c_8_2
Type: TC
Location: 854 - 2038 (-)
Type: TC
Location: 854 - 2038 (-)
Gene ID: Rep_807_c_8_3
Type: TC
Location: 2035 - 2781 (-)
Type: TC
Location: 2035 - 2781 (-)
Gene ID: Rep_807_c_8_4
Type: peptidase
Location: 2778 - 4304 (-)
Type: peptidase
Location: 2778 - 4304 (-)
Gene ID: Rep_807_c_8_5
Type: TC
Location: 4373 - 5575 (-)
Type: TC
Location: 4373 - 5575 (-)
Gene ID: Rep_807_c_8_6
Type: pfam
Location: 5730 - 6257 (+)
Type: pfam
Location: 5730 - 6257 (+)
Gene ID: Rep_807_c_8_7
Type: CAZyme
Location: 6449 - 7615 (+)
Type: CAZyme
Location: 6449 - 7615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.