Cluster: Rep_807_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_807_c_169 | Rep_807_c_169_1 | 305 | 2770 | + | GH92 |
| TF | Rep_807_c_169 | Rep_807_c_169_2 | 2867 | 3919 | + | LacI |
| TC | Rep_807_c_169 | Rep_807_c_169_3 | 3980 | 5293 | + | 2.A.1.7.10 |
| STP | Rep_807_c_169 | Rep_807_c_169_4 | 5301 | 6296 | + | PfkB |
| pfam | Rep_807_c_169 | Rep_807_c_169_5 | 6293 | 7519 | + | GlcNAc_2-epim |
| CAZyme | Rep_807_c_169 | Rep_807_c_169_6 | 7610 | 10228 | + | GH2 |
Gene ID: Rep_807_c_169_1
Type: CAZyme
Location: 305 - 2770 (+)
Type: CAZyme
Location: 305 - 2770 (+)
Gene ID: Rep_807_c_169_2
Type: TF
Location: 2867 - 3919 (+)
Type: TF
Location: 2867 - 3919 (+)
Gene ID: Rep_807_c_169_3
Type: TC
Location: 3980 - 5293 (+)
Type: TC
Location: 3980 - 5293 (+)
Gene ID: Rep_807_c_169_4
Type: STP
Location: 5301 - 6296 (+)
Type: STP
Location: 5301 - 6296 (+)
Gene ID: Rep_807_c_169_5
Type: pfam
Location: 6293 - 7519 (+)
Type: pfam
Location: 6293 - 7519 (+)
Gene ID: Rep_807_c_169_6
Type: CAZyme
Location: 7610 - 10228 (+)
Type: CAZyme
Location: 7610 - 10228 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.