Cluster: Rep_807_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- CGC Family ID: CGCFAM_05588
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_166 | Rep_807_c_166_1 | 105 | 2966 | - | 1.B.14.3.1 |
| pfam | Rep_807_c_166 | Rep_807_c_166_2 | 3238 | 3645 | - | ExbD |
| TC | Rep_807_c_166 | Rep_807_c_166_3 | 3717 | 4124 | - | 1.A.30.2.7 |
| CAZyme | Rep_807_c_166 | Rep_807_c_166_4 | 4276 | 6261 | + | GH23 |
Gene ID: Rep_807_c_166_1
Type: TC
Location: 105 - 2966 (-)
Type: TC
Location: 105 - 2966 (-)
Gene ID: Rep_807_c_166_2
Type: pfam
Location: 3238 - 3645 (-)
Type: pfam
Location: 3238 - 3645 (-)
Gene ID: Rep_807_c_166_3
Type: TC
Location: 3717 - 4124 (-)
Type: TC
Location: 3717 - 4124 (-)
Gene ID: Rep_807_c_166_4
Type: CAZyme
Location: 4276 - 6261 (+)
Type: CAZyme
Location: 4276 - 6261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.