Cluster: Rep_807_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_807_c_125 | Rep_807_c_125_2 | 670 | 1689 | - | GT2 |
| CAZyme | Rep_807_c_125 | Rep_807_c_125_3 | 1753 | 2502 | - | GT51 |
| pfam | Rep_807_c_125 | Rep_807_c_125_4 | 2580 | 3473 | + | HSP33 |
| NULL(UNKNOWN) | Rep_807_c_125 | Rep_807_c_125_5 | 3590 | 4438 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_807_c_125 | Rep_807_c_125_6 | 4822 | 7710 | + | 1.B.14.3.1 |
Gene ID: Rep_807_c_125_2
Type: CAZyme
Location: 670 - 1689 (-)
Type: CAZyme
Location: 670 - 1689 (-)
Gene ID: Rep_807_c_125_3
Type: CAZyme
Location: 1753 - 2502 (-)
Type: CAZyme
Location: 1753 - 2502 (-)
Gene ID: Rep_807_c_125_4
Type: pfam
Location: 2580 - 3473 (+)
Type: pfam
Location: 2580 - 3473 (+)
Gene ID: Rep_807_c_125_5
Type:
Location: 3590 - 4438 (+)
Type:
Location: 3590 - 4438 (+)
Gene ID: Rep_807_c_125_6
Type: TC
Location: 4822 - 7710 (+)
Type: TC
Location: 4822 - 7710 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.