Cluster: Rep_807_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_807_c_119 | Rep_807_c_119_3 | 1752 | 2675 | + | GH23 |
| TC | Rep_807_c_119 | Rep_807_c_119_4 | 2894 | 3514 | + | 3.D.3.1.1 |
| TC | Rep_807_c_119 | Rep_807_c_119_5 | 3514 | 4773 | + | 3.D.3.1.1 |
| pfam | Rep_807_c_119 | Rep_807_c_119_6 | 4766 | 5515 | + | Cytochrom_C1 |
| TC | Rep_807_c_119 | Rep_807_c_119_7 | 5650 | 6285 | + | 1.A.12.3.1 |
Gene ID: Rep_807_c_119_3
Type: CAZyme
Location: 1752 - 2675 (+)
Type: CAZyme
Location: 1752 - 2675 (+)
Gene ID: Rep_807_c_119_4
Type: TC
Location: 2894 - 3514 (+)
Type: TC
Location: 2894 - 3514 (+)
Gene ID: Rep_807_c_119_5
Type: TC
Location: 3514 - 4773 (+)
Type: TC
Location: 3514 - 4773 (+)
Gene ID: Rep_807_c_119_6
Type: pfam
Location: 4766 - 5515 (+)
Type: pfam
Location: 4766 - 5515 (+)
Gene ID: Rep_807_c_119_7
Type: TC
Location: 5650 - 6285 (+)
Type: TC
Location: 5650 - 6285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.