Cluster: Rep_807_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- CGC Family ID: CGCFAM_10454
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_111 | Rep_807_c_111_1 | 1 | 423 | - | 9.B.44.1.2 |
| sulfatase | Rep_807_c_111 | Rep_807_c_111_2 | 592 | 1758 | + | S1_8 |
| NULL(UNKNOWN) | Rep_807_c_111 | Rep_807_c_111_3 | 1829 | 2347 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_807_c_111 | Rep_807_c_111_4 | 2479 | 4653 | - | GH3 |
| TC | Rep_807_c_111 | Rep_807_c_111_5 | 4782 | 6053 | - | 1.A.23.4.5 |
Gene ID: Rep_807_c_111_1
Type: TC
Location: 1 - 423 (-)
Type: TC
Location: 1 - 423 (-)
Gene ID: Rep_807_c_111_2
Type: sulfatase
Location: 592 - 1758 (+)
Type: sulfatase
Location: 592 - 1758 (+)
Gene ID: Rep_807_c_111_3
Type:
Location: 1829 - 2347 (-)
Type:
Location: 1829 - 2347 (-)
Gene ID: Rep_807_c_111_4
Type: CAZyme
Location: 2479 - 4653 (-)
Type: CAZyme
Location: 2479 - 4653 (-)
Gene ID: Rep_807_c_111_5
Type: TC
Location: 4782 - 6053 (-)
Type: TC
Location: 4782 - 6053 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.