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Cluster: Rep_807_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_807_c_101 Rep_807_c_101_2 1383 2498 - GT4
pfam Rep_807_c_101 Rep_807_c_101_3 2514 2711 - zf-CHCC
CAZyme Rep_807_c_101 Rep_807_c_101_4 3131 6475 + GH92
pfam Rep_807_c_101 Rep_807_c_101_5 6472 7215 + BSP
pfam Rep_807_c_101 Rep_807_c_101_6 7666 9957 - malic | PTA_PTB | Malic_M
TC Rep_807_c_101 Rep_807_c_101_7 10188 11531 - 2.A.23.1.3
pfam Rep_807_c_101 Rep_807_c_101_8 11864 12454 + Porin_O_P
pfam Rep_807_c_101 Rep_807_c_101_9 12424 13029 + Porin_O_P
TC Rep_807_c_101 Rep_807_c_101_10 13096 15738 + 2.A.21.9.2
Gene ID: Rep_807_c_101_2
Type: CAZyme
Location: 1383 - 2498 (-)
Gene ID: Rep_807_c_101_3
Type: pfam
Location: 2514 - 2711 (-)
Gene ID: Rep_807_c_101_4
Type: CAZyme
Location: 3131 - 6475 (+)
Gene ID: Rep_807_c_101_5
Type: pfam
Location: 6472 - 7215 (+)
Gene ID: Rep_807_c_101_6
Type: pfam
Location: 7666 - 9957 (-)
Gene ID: Rep_807_c_101_7
Type: TC
Location: 10188 - 11531 (-)
Gene ID: Rep_807_c_101_8
Type: pfam
Location: 11864 - 12454 (+)
Gene ID: Rep_807_c_101_9
Type: pfam
Location: 12424 - 13029 (+)
Gene ID: Rep_807_c_101_10
Type: TC
Location: 13096 - 15738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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