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Cluster: Rep_807_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_807_c_92 Rep_807_c_92_1 93 3458 - 1.B.12.5.7
pfam Rep_807_c_92 Rep_807_c_92_2 3741 4808 - HGSNAT_cat
CAZyme Rep_807_c_92 Rep_807_c_92_3 4808 5956 - CE9
STP Rep_807_c_92 Rep_807_c_92_4 5956 6984 - SIS | SIS
TF Rep_807_c_92 Rep_807_c_92_5 6992 8059 - LacI
TC Rep_807_c_92 Rep_807_c_92_6 8099 9388 - 2.A.1.7.9
STP Rep_807_c_92 Rep_807_c_92_7 9765 10781 + Glucokinase
TC Rep_807_c_92 Rep_807_c_92_8 10925 13588 + 1.B.14.12.2
CAZyme Rep_807_c_92 Rep_807_c_92_9 13700 16057 + GH20
Gene ID: Rep_807_c_92_1
Type: TC
Location: 93 - 3458 (-)
Gene ID: Rep_807_c_92_2
Type: pfam
Location: 3741 - 4808 (-)
Gene ID: Rep_807_c_92_3
Type: CAZyme
Location: 4808 - 5956 (-)
Gene ID: Rep_807_c_92_4
Type: STP
Location: 5956 - 6984 (-)
Gene ID: Rep_807_c_92_5
Type: TF
Location: 6992 - 8059 (-)
Gene ID: Rep_807_c_92_6
Type: TC
Location: 8099 - 9388 (-)
Gene ID: Rep_807_c_92_7
Type: STP
Location: 9765 - 10781 (+)
Gene ID: Rep_807_c_92_8
Type: TC
Location: 10925 - 13588 (+)
Gene ID: Rep_807_c_92_9
Type: CAZyme
Location: 13700 - 16057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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