Cluster: Rep_807_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_74 | Rep_807_c_74_8 | 10980 | 12656 | - | 4.C.1.1.4 |
| CAZyme | Rep_807_c_74 | Rep_807_c_74_9 | 12892 | 14574 | - | AA3_2 |
| sulfatase | Rep_807_c_74 | Rep_807_c_74_10 | 14676 | 16148 | - | S1_6 |
| STP | Rep_807_c_74 | Rep_807_c_74_11 | 16188 | 16778 | - | TetR_N |
| TC | Rep_807_c_74 | Rep_807_c_74_12 | 16949 | 18499 | + | 2.A.15.1.3 |
Gene ID: Rep_807_c_74_8
Type: TC
Location: 10980 - 12656 (-)
Type: TC
Location: 10980 - 12656 (-)
Gene ID: Rep_807_c_74_9
Type: CAZyme
Location: 12892 - 14574 (-)
Type: CAZyme
Location: 12892 - 14574 (-)
Gene ID: Rep_807_c_74_10
Type: sulfatase
Location: 14676 - 16148 (-)
Type: sulfatase
Location: 14676 - 16148 (-)
Gene ID: Rep_807_c_74_11
Type: STP
Location: 16188 - 16778 (-)
Type: STP
Location: 16188 - 16778 (-)
Gene ID: Rep_807_c_74_12
Type: TC
Location: 16949 - 18499 (+)
Type: TC
Location: 16949 - 18499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.